jp.ac.keio.bio.fun.xitosbml.util

Class PluginConstants

java.lang.Object

jp.ac.keio.bio.fun.xitosbml.util.PluginConstants

public class PluginConstants
extends Object

The class PluginConstants, which contains constant values used in XitoSBML. This class also contains a method to generate CellDesigner annotation string. Date Created: Jun 20, 2015

Author:

Kaito Ii <ii@fun.bio.keio.ac.jp>, Akira Funahashi <funa@bio.keio.ac.jp>

Field Summary

Fields

Modifier and Type	Field and Description
static String	CDNAMESPACE The Constant CDNAMESPACE.
static int	LOWERSBMLLEVEL The Constant LOWERSBMLLEVEL.
static int	LOWERSBMLVERSION The Constant LOWERSBMLVERSION.
static String	OUTSIDE The Constant OUTSIDE.
static int	SBMLLEVEL The Constant SBMLLEVEL.
static int	SBMLVERSION The Constant SBMLVERSION.
static String	TAG_CELLDESIGNER_EXTENSIONTOPLEVEL
static String	TAG_CELLDESIGNER_PREFIX The Constant CDURI.
static String	TAG_END_ANNOTATION The Constant TAG_END_ANNOTATION.
static String	TAG_END_CELLDESIGNER The Constant TAG_END_CELLDESIGNER.
static String	TAG_START_ANNOTATION The Constant TAG_START_ANNOTATION.
static String	TAG_START_CELLDESIGNER The Constant TAG_START_CELLDESIGNER.
static double	VIEWERVERSION The Constant VIEWERVERSION.

Constructor Summary

Constructors

Constructor and Description
PluginConstants()

Method Summary

Modifier and Type	Method and Description
static String	addCellDesignerAnnotationTag(String annotationStr) Generate CellDesigner annotation with given annotation string.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

VIEWERVERSION

public static final double VIEWERVERSION

The Constant VIEWERVERSION.

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Constant Field Values

SBMLLEVEL

public static final int SBMLLEVEL

The Constant SBMLLEVEL.

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Constant Field Values

SBMLVERSION

public static final int SBMLVERSION

The Constant SBMLVERSION.

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Constant Field Values

LOWERSBMLLEVEL

public static final int LOWERSBMLLEVEL

The Constant LOWERSBMLLEVEL.

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Constant Field Values

LOWERSBMLVERSION

public static final int LOWERSBMLVERSION

The Constant LOWERSBMLVERSION.

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Constant Field Values

CDNAMESPACE

public static final String CDNAMESPACE

The Constant CDNAMESPACE.

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Constant Field Values

TAG_CELLDESIGNER_PREFIX

public static final String TAG_CELLDESIGNER_PREFIX

The Constant CDURI.

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Constant Field Values

TAG_START_ANNOTATION

public static final String TAG_START_ANNOTATION

The Constant TAG_START_ANNOTATION.

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Constant Field Values

TAG_START_CELLDESIGNER

public static final String TAG_START_CELLDESIGNER

The Constant TAG_START_CELLDESIGNER.

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Constant Field Values

OUTSIDE

public static final String OUTSIDE

The Constant OUTSIDE.

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Constant Field Values

TAG_END_ANNOTATION

public static final String TAG_END_ANNOTATION

The Constant TAG_END_ANNOTATION.

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Constant Field Values

TAG_END_CELLDESIGNER

public static final String TAG_END_CELLDESIGNER

The Constant TAG_END_CELLDESIGNER.

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Constant Field Values

TAG_CELLDESIGNER_EXTENSIONTOPLEVEL

public static final String TAG_CELLDESIGNER_EXTENSIONTOPLEVEL

See Also:

Constant Field Values

Constructor Detail

PluginConstants

public PluginConstants()

Method Detail

addCellDesignerAnnotationTag

public static String addCellDesignerAnnotationTag(String annotationStr)

Generate CellDesigner annotation with given annotation string.

Parameters:

annotationStr - the CellDesigner annotation string

Returns:

generated CellDesigner annotation string