jp.ac.keio.bio.fun.xitosbml.pane

Class ReactionDialog

java.lang.Object

jp.ac.keio.bio.fun.xitosbml.pane.ReactionDialog

public class ReactionDialog
extends Object

The class ReactionDialog, which generates a GUI for creating / editing a Reaction. This class is used in ReactionTable. Date Created: Jan 22, 2016

Author:

Kaito Ii <ii@fun.bio.keio.ac.jp>, Akira Funahashi <funa@bio.keio.ac.jp>

Constructor Summary

Constructors

Constructor and Description
ReactionDialog(org.sbml.jsbml.Model model) Instantiates a new reaction dialog.

Method Summary

Modifier and Type	Method and Description
org.sbml.jsbml.Reaction	showDialog() Create and show a dialog for adding Reaction.
org.sbml.jsbml.Reaction	showDialog(org.sbml.jsbml.Reaction reaction) Create and show a dialog for adding Reaction with given JSBML Reaction object.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ReactionDialog

public ReactionDialog(org.sbml.jsbml.Model model)

Instantiates a new reaction dialog.

Parameters:

model - the SBML model

Method Detail

showDialog

public org.sbml.jsbml.Reaction showDialog()
                                   throws IllegalArgumentException,
                                          org.sbml.jsbml.text.parser.ParseException

Create and show a dialog for adding Reaction. If a user creates a reaction through this dialog, then a Reaction object will be returned. If not, null is returned.

Returns:

the JSBML Reaction object if a reaction is created

Throws:

IllegalArgumentException - the illegal argument exception

org.sbml.jsbml.text.parser.ParseException - the parse exception

showDialog

public org.sbml.jsbml.Reaction showDialog(org.sbml.jsbml.Reaction reaction)
                                   throws IllegalArgumentException,
                                          org.sbml.jsbml.text.parser.ParseException

Create and show a dialog for adding Reaction with given JSBML Reaction object. If a user edits the reaction through this dialog, then a Reaction object will be returned. If not, null is returned.

Parameters:

reaction - the JSBML Reaction object

Returns:

the JSBML Reaction object if the reaction is edited

Throws:

IllegalArgumentException - the illegal argument exception

org.sbml.jsbml.text.parser.ParseException - the parse exception