jp.ac.keio.bio.fun.xitosbml.image

Class SplitDomains

java.lang.Object

jp.ac.keio.bio.fun.xitosbml.image.SplitDomains

public class SplitDomains
extends Object

The class SplitDomain, which provides several image processing filters to split domains with given pixel value (sampled value). Date Created: Aug 27, 2015

Author:

Kaito Ii <ii@fun.bio.keio.ac.jp>, Akira Funahashi <funa@bio.keio.ac.jp>

Constructor Summary

Constructors

Constructor and Description
SplitDomains(SpatialImage spImg, String targetDomain) Instantiates a new split domains with given SpatialImage.

Method Summary

Modifier and Type	Method and Description
Set<Integer>	getAdjacentToTargetList() Gets the hashset of target of adjacent pixels.
ij.ImageStack	getStackImage() Gets the stack of split images.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SplitDomains

public SplitDomains(SpatialImage spImg,
                    String targetDomain)

Instantiates a new split domains with given SpatialImage.

Parameters:

spImg - the SpatialImage object

targetDomain - the target domain

Method Detail

getStackImage

public ij.ImageStack getStackImage()

Gets the stack of split images.

Returns:

the stack image

getAdjacentToTargetList

public Set<Integer> getAdjacentToTargetList()

Gets the hashset of target of adjacent pixels.

Returns:

the hashset of target of adjacent pixels